STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_00236Rab-GAP TBC domain-containing protein. (412 aa)    
Predicted Functional Partners:
PAAG_08028
GTP-binding protein ypt1.
    
 0.984
PAAG_00237
Protein YIP.
 
      0.885
PAAG_06053
Uncharacterized protein.
    
 0.757
PAAG_04891
GTPase-activating protein GYP2.
      
 0.575
PAAG_04586
GTPase-activating protein GYP7.
   
  
 0.574
PAAG_00993
GTPase-activating protein GYP1.
   
 
 0.573
PAAG_02614
Rab-GAP TBC domain-containing protein.
      
 0.551
PAAG_08607
Rab-GAP TBC domain-containing protein.
    
 
 0.517
PAAG_02765
Iron-sulfur cluster assembly associated protein Nar1; Belongs to the NARF family.
   
  
 0.483
PAAG_07264
Cell division cycle protein.
      
 0.455
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.