Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAAG_00296 | PAAG_00297 | C1GP51 | C1GP52 | Uncharacterized protein. | Uncharacterized protein. | 0.535 |
PAAG_00297 | PAAG_00296 | C1GP52 | C1GP51 | Uncharacterized protein. | Uncharacterized protein. | 0.535 |
PAAG_00297 | PAAG_06021 | C1GP52 | C1H5I0 | Uncharacterized protein. | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. | 0.483 |
PAAG_00297 | PAAG_07631 | C1GP52 | C1HAH7 | Uncharacterized protein. | Short chain dehydrogenase/reductase family protein. | 0.428 |
PAAG_00297 | RPS1 | C1GP52 | C1HDW2 | Uncharacterized protein. | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.510 |
PAAG_06021 | PAAG_00297 | C1H5I0 | C1GP52 | Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family. | Uncharacterized protein. | 0.483 |
PAAG_07631 | PAAG_00297 | C1HAH7 | C1GP52 | Short chain dehydrogenase/reductase family protein. | Uncharacterized protein. | 0.428 |
RPS1 | PAAG_00297 | C1HDW2 | C1GP52 | 40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. | Uncharacterized protein. | 0.510 |