Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAAG_00383 | PAAG_00707 | C1GPD8 | C1GQB2 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 2-nitropropane dioxygenase. | 0.705 |
PAAG_00383 | PAAG_01436 | C1GPD8 | C1GSE1 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 54S ribosomal protein L23; Belongs to the universal ribosomal protein uL13 family. | 0.998 |
PAAG_00383 | PAAG_02961 | C1GPD8 | C1GWR6 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Ribosomal_L18e/L15P domain-containing protein. | 0.999 |
PAAG_00383 | PAAG_03608 | C1GPD8 | C1GXN4 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | tRNA modification GTPase GTPBP3. | 0.854 |
PAAG_00383 | PAAG_04996 | C1GPD8 | C1H2K3 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | EngB-type G domain-containing protein. | 0.873 |
PAAG_00383 | PAAG_05233 | C1GPD8 | C1H390 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 60S ribosomal protein L26. | 0.999 |
PAAG_00383 | PAAG_06966 | C1GPD8 | C1H8H0 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | RNA methyltransferase. | 0.902 |
PAAG_00383 | PAAG_07484 | C1GPD8 | C1H9P3 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 54S ribosomal protein L9. | 0.998 |
PAAG_00383 | PAAG_07867 | C1GPD8 | C1HB03 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Carrier domain-containing protein. | 0.980 |
PAAG_00383 | PAAG_08795 | C1GPD8 | C1HDF4 | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | Pseudouridine synthase. | 0.864 |
PAAG_00707 | PAAG_00383 | C1GQB2 | C1GPD8 | 2-nitropropane dioxygenase. | 50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family. | 0.705 |
PAAG_00707 | PAAG_01436 | C1GQB2 | C1GSE1 | 2-nitropropane dioxygenase. | 54S ribosomal protein L23; Belongs to the universal ribosomal protein uL13 family. | 0.637 |
PAAG_00707 | PAAG_02961 | C1GQB2 | C1GWR6 | 2-nitropropane dioxygenase. | Ribosomal_L18e/L15P domain-containing protein. | 0.689 |
PAAG_00707 | PAAG_03608 | C1GQB2 | C1GXN4 | 2-nitropropane dioxygenase. | tRNA modification GTPase GTPBP3. | 0.735 |
PAAG_00707 | PAAG_04996 | C1GQB2 | C1H2K3 | 2-nitropropane dioxygenase. | EngB-type G domain-containing protein. | 0.660 |
PAAG_00707 | PAAG_05233 | C1GQB2 | C1H390 | 2-nitropropane dioxygenase. | 60S ribosomal protein L26. | 0.677 |
PAAG_00707 | PAAG_06966 | C1GQB2 | C1H8H0 | 2-nitropropane dioxygenase. | RNA methyltransferase. | 0.718 |
PAAG_00707 | PAAG_07484 | C1GQB2 | C1H9P3 | 2-nitropropane dioxygenase. | 54S ribosomal protein L9. | 0.645 |
PAAG_00707 | PAAG_07867 | C1GQB2 | C1HB03 | 2-nitropropane dioxygenase. | Carrier domain-containing protein. | 0.671 |
PAAG_00707 | PAAG_08795 | C1GQB2 | C1HDF4 | 2-nitropropane dioxygenase. | Pseudouridine synthase. | 0.721 |
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