STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_02724G-patch domain-containing protein. (791 aa)    
Predicted Functional Partners:
PAAG_02403
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43.
   
 0.997
PAAG_07387
Cell cycle control protein cwf14.
    
   0.987
PAAG_02853
Pre-mRNA-splicing factor CLF1.
   
   0.986
PAAG_07785
116 kDa U5 small nuclear ribonucleoprotein component.
   
 
 0.960
PAAG_06793
Pre-mRNA-processing-splicing factor 8.
    
 
 0.950
PAAG_06400
Pre-mRNA-processing factor 17.
   
 0.949
PAAG_02329
U2 small nuclear ribonucleoprotein A.
    
 
 0.916
PAAG_02435
Pre-mRNA-splicing factor syf1.
   
 
 0.915
PAAG_08882
Pre-mRNA-processing protein.
    
 
 0.892
PAAG_08280
Pre-mRNA-splicing factor syf2.
    
  0.888
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.