STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_02829Nefa_Nip30_N domain-containing protein. (256 aa)    
Predicted Functional Partners:
PAAG_02435
Pre-mRNA-splicing factor syf1.
    
   0.714
PAAG_02262
Pre-mRNA-splicing factor cef1.
    
   0.714
PAAG_06793
Pre-mRNA-processing-splicing factor 8.
    
   0.714
PAAG_01017
Cog4 domain-containing protein.
      
 0.506
PAAG_06761
RNA-binding protein 8A.
   
   0.480
PAAG_07283
ATP-dependent RNA helicase FAL1; Belongs to the DEAD box helicase family.
   
   0.471
PAAG_07883
BCAS2 domain-containing protein.
   
   0.471
PAAG_04469
Uncharacterized protein.
    
 
 0.470
PAAG_07809
Mitochondrial import inner membrane translocase subunit tim22.
    
   0.469
PAAG_07164
Uncharacterized protein.
    
 
 0.466
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.