Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAAG_00060 | PAAG_03900 | C1GNG5 | C1GZF6 | AvaB protein. | GTP-binding protein YPT52. | 0.949 |
PAAG_00060 | PAAG_05731 | C1GNG5 | C1H4N8 | AvaB protein. | Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. | 0.996 |
PAAG_00242 | PAAG_00802 | C1GNZ7 | C1GQK7 | Vps52 / Sac2 family protein. | Vacuolar protein sorting 53. | 0.991 |
PAAG_00242 | PAAG_01452 | C1GNZ7 | C1GSF7 | Vps52 / Sac2 family protein. | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | 0.644 |
PAAG_00242 | PAAG_02822 | C1GNZ7 | C1GWC7 | Vps52 / Sac2 family protein. | RIC1 domain-containing protein. | 0.610 |
PAAG_00242 | PAAG_03900 | C1GNZ7 | C1GZF6 | Vps52 / Sac2 family protein. | GTP-binding protein YPT52. | 0.883 |
PAAG_00242 | PAAG_05060 | C1GNZ7 | C1H2R7 | Vps52 / Sac2 family protein. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.852 |
PAAG_00242 | PAAG_08250 | C1GNZ7 | C1HBV9 | Vps52 / Sac2 family protein. | t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. | 0.848 |
PAAG_00802 | PAAG_00242 | C1GQK7 | C1GNZ7 | Vacuolar protein sorting 53. | Vps52 / Sac2 family protein. | 0.991 |
PAAG_00802 | PAAG_01452 | C1GQK7 | C1GSF7 | Vacuolar protein sorting 53. | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | 0.680 |
PAAG_00802 | PAAG_03900 | C1GQK7 | C1GZF6 | Vacuolar protein sorting 53. | GTP-binding protein YPT52. | 0.884 |
PAAG_00802 | PAAG_05060 | C1GQK7 | C1H2R7 | Vacuolar protein sorting 53. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.849 |
PAAG_00802 | PAAG_05731 | C1GQK7 | C1H4N8 | Vacuolar protein sorting 53. | Vacuolar protein sorting-associated protein 33A; Belongs to the STXBP/unc-18/SEC1 family. | 0.595 |
PAAG_00802 | PAAG_08250 | C1GQK7 | C1HBV9 | Vacuolar protein sorting 53. | t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. | 0.881 |
PAAG_01452 | PAAG_00242 | C1GSF7 | C1GNZ7 | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | Vps52 / Sac2 family protein. | 0.644 |
PAAG_01452 | PAAG_00802 | C1GSF7 | C1GQK7 | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | Vacuolar protein sorting 53. | 0.680 |
PAAG_01452 | PAAG_02822 | C1GSF7 | C1GWC7 | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | RIC1 domain-containing protein. | 0.660 |
PAAG_01452 | PAAG_03900 | C1GSF7 | C1GZF6 | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | GTP-binding protein YPT52. | 0.913 |
PAAG_01452 | PAAG_05060 | C1GSF7 | C1H2R7 | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. | 0.764 |
PAAG_01452 | PAAG_08250 | C1GSF7 | C1HBV9 | ADP-ribosylation factor; Belongs to the small GTPase superfamily. Arf family. | t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. | 0.724 |
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