Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PAAG_00338 | PAAG_04538 | C1GP93 | C1H194 | Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | Extradiol ring-cleavage dioxygenase. | 0.421 |
PAAG_04489 | PAAG_04538 | C1H145 | C1H194 | Acyl-protein thioesterase. | Extradiol ring-cleavage dioxygenase. | 0.475 |
PAAG_04537 | PAAG_04538 | C1H193 | C1H194 | Uncharacterized protein. | Extradiol ring-cleavage dioxygenase. | 0.585 |
PAAG_04538 | PAAG_00338 | C1H194 | C1GP93 | Extradiol ring-cleavage dioxygenase. | Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.421 |
PAAG_04538 | PAAG_04489 | C1H194 | C1H145 | Extradiol ring-cleavage dioxygenase. | Acyl-protein thioesterase. | 0.475 |
PAAG_04538 | PAAG_04537 | C1H194 | C1H193 | Extradiol ring-cleavage dioxygenase. | Uncharacterized protein. | 0.585 |
PAAG_04538 | PAAG_08585 | C1H194 | C1HCT9 | Extradiol ring-cleavage dioxygenase. | Thiosulfate sulfurtransferase. | 0.513 |
PAAG_08585 | PAAG_04538 | C1HCT9 | C1H194 | Thiosulfate sulfurtransferase. | Extradiol ring-cleavage dioxygenase. | 0.513 |