STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_06628RNA pseudouridylate synthase domain-containing protein. (525 aa)    
Predicted Functional Partners:
PAAG_08795
Pseudouridine synthase.
    
 
 0.852
PAAG_03608
tRNA modification GTPase GTPBP3.
  
 
 0.742
PAAG_06966
RNA methyltransferase.
  
 
 0.718
PAAG_00383
50S ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
   0.705
PAAG_02961
Ribosomal_L18e/L15P domain-containing protein.
  
   0.689
PAAG_05233
60S ribosomal protein L26.
   
   0.677
PAAG_07867
Carrier domain-containing protein.
  
 
 0.674
PAAG_04996
EngB-type G domain-containing protein.
   
 
 0.660
PAAG_02488
tRNA pseudouridine synthase.
  
 
 0.658
PAAG_07484
54S ribosomal protein L9.
   
 
 0.645
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.