STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_06808Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (487 aa)    
Predicted Functional Partners:
PAAG_08875
Histone acetyltransferase type B subunit 2.
   
 0.960
PAAG_06750
Nsp1_C domain-containing protein.
   
 
 0.956
PAAG_05007
WD repeat-containing protein.
   
 0.916
PAAG_02095
Uncharacterized protein.
    
 0.915
PAAG_09030
Uncharacterized protein.
    
 0.902
PAAG_07019
Lysine-specific histone demethylase.
   
 0.895
PAAG_06967
Chromodomain-helicase-DNA-binding protein.
   
 0.884
PAAG_02620
Histone acetylase complex subunit.
    
 0.872
PAAG_06123
ENDO3c domain-containing protein.
    
 0.870
PAAG_04824
FAS1 domain-containing protein.
   
 0.869
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.