STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_08648GTP-binding protein RBG1. (422 aa)    
Predicted Functional Partners:
PAAG_05230
Uncharacterized protein.
   
 
 0.996
PAAG_02775
RWD domain-containing protein.
   
 
 0.928
PAAG_07385
60S ribosomal protein L23a.
   
   0.768
PAAG_00801
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
  
   0.765
PAAG_01785
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
   0.765
PAAG_00430
60S ribosomal protein L2.
   
 
 0.764
PAAG_04548
Prion formation protein.
   
 
 0.728
PAAG_06487
60S ribosomal protein L7-C.
   
   0.717
PAAG_00466
Uncharacterized protein.
    
   0.714
PAAG_00984
DNA polymerase epsilon subunit B.
    
 
 0.714
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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