STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAAG_08667U3 small nucleolar ribonucleoprotein IMP4. (309 aa)    
Predicted Functional Partners:
PAAG_07495
U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family.
   
 0.999
PAAG_07532
U3 small nucleolar ribonucleoprotein IMP3.
   
 0.999
PAAG_08375
U3 small nucleolar RNA-associated protein.
   
  0.998
PAAG_01511
WD_REPEATS_REGION domain-containing protein.
   
 
 0.997
PAAG_00751
U3 small nucleolar RNA-associated protein.
   
   0.997
PAAG_00754
Ribosomal RNA-processing protein.
   
 
 0.997
PAAG_01540
Bystin.
   
 
 0.997
PAAG_08881
Periodic tryptophan protein.
   
   0.997
PAAG_08927
U3 small nucleolar RNA-associated protein 22.
   
  0.997
PAAG_04640
U3 small nucleolar RNA-associated protein.
   
  0.996
Your Current Organism:
Paracoccidioides lutzii
NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01
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