PAAG_08916 protein (Paracoccidioides lutzii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

PAAG_08916

LYR family protein; Belongs to the complex I LYR family. (132 aa)

Predicted Functional Partners:

PAAG_00458

0.999

PAAG_01044

0.999

PAAG_01307

0.999

PAAG_01659

0.999

PAAG_02266

0.999

PAAG_02656

0.999

PAAG_03546

0.999

PAAG_03051

0.999

PAAG_04015

0.999

PAAG_04539

0.999

Your Current Organism:

Paracoccidioides lutzii

NCBI taxonomy Id: 502779
Other names: P. lutzii Pb01, Paracoccidioides brasiliensis Pb01, Paracoccidioides lutzii Pb01

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PAAG_00458	PAAG_01044	C1GPL3	C1GR99	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 24 kDa subunit.	0.999
PAAG_00458	PAAG_01307	C1GPL3	C1GS12	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase iron-sulfur protein; Belongs to the complex I 30 kDa subunit family.	0.999
PAAG_00458	PAAG_01659	C1GPL3	C1GT14	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 12 kDa subunit.	0.999
PAAG_00458	PAAG_02266	C1GPL3	C1GVI9	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 21 kDa subunit.	0.999
PAAG_00458	PAAG_02656	C1GPL3	C1GVW1	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.999
PAAG_00458	PAAG_03051	C1GPL3	C1GY97	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
PAAG_00458	PAAG_03546	C1GPL3	C1GXH2	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.999
PAAG_00458	PAAG_04015	C1GPL3	C1GZS1	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	Uncharacterized protein.	0.999
PAAG_00458	PAAG_04539	C1GPL3	C1H195	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	NADH-ubiquinone oxidoreductase 105 kDa subunit.	0.999
PAAG_00458	PAAG_08916	C1GPL3	C1HDS3	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	LYR family protein; Belongs to the complex I LYR family.	0.999
PAAG_01044	PAAG_00458	C1GR99	C1GPL3	NADH-ubiquinone oxidoreductase 24 kDa subunit.	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
PAAG_01044	PAAG_01307	C1GR99	C1GS12	NADH-ubiquinone oxidoreductase 24 kDa subunit.	NADH dehydrogenase iron-sulfur protein; Belongs to the complex I 30 kDa subunit family.	0.999
PAAG_01044	PAAG_01659	C1GR99	C1GT14	NADH-ubiquinone oxidoreductase 24 kDa subunit.	NADH-ubiquinone oxidoreductase 12 kDa subunit.	0.962
PAAG_01044	PAAG_02266	C1GR99	C1GVI9	NADH-ubiquinone oxidoreductase 24 kDa subunit.	NADH-ubiquinone oxidoreductase 21 kDa subunit.	0.999
PAAG_01044	PAAG_02656	C1GR99	C1GVW1	NADH-ubiquinone oxidoreductase 24 kDa subunit.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.999
PAAG_01044	PAAG_03051	C1GR99	C1GY97	NADH-ubiquinone oxidoreductase 24 kDa subunit.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.999
PAAG_01044	PAAG_03546	C1GR99	C1GXH2	NADH-ubiquinone oxidoreductase 24 kDa subunit.	Uncharacterized protein.	0.999
PAAG_01044	PAAG_04015	C1GR99	C1GZS1	NADH-ubiquinone oxidoreductase 24 kDa subunit.	Uncharacterized protein.	0.998
PAAG_01044	PAAG_04539	C1GR99	C1H195	NADH-ubiquinone oxidoreductase 24 kDa subunit.	NADH-ubiquinone oxidoreductase 105 kDa subunit.	0.999
PAAG_01044	PAAG_08916	C1GR99	C1HDS3	NADH-ubiquinone oxidoreductase 24 kDa subunit.	LYR family protein; Belongs to the complex I LYR family.	0.999