Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LSM5 | PADG_01620 | C1GN72 | C1G3V4 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | Uncharacterized protein. | 0.984 |
LSM5 | PADG_02530 | C1GN72 | C1G5S5 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | Small nuclear ribonucleoprotein G. | 0.957 |
LSM5 | PADG_03214 | C1GN72 | C1G7Q9 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.987 |
LSM5 | PADG_03644 | C1GN72 | C1G8Q8 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | RRM domain-containing protein. | 0.557 |
LSM5 | PADG_04077 | C1GN72 | C1G9Z1 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | Uncharacterized protein. | 0.566 |
LSM5 | PADG_04301 | C1GN72 | C1GAL5 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | WD_REPEATS_REGION domain-containing protein. | 0.638 |
LSM5 | PADG_04762-2 | C1GN72 | A0A0A0HX85 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | SNRNP27 domain-containing protein. | 0.681 |
LSM5 | PADG_06734 | C1GN72 | C1GHJ8 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | Sm domain-containing protein. | 0.999 |
LSM5 | PADG_06856 | C1GN72 | C1GHX0 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | Small nuclear ribonucleoprotein Sm D2. | 0.989 |
LSM5 | PADG_07250 | C1GN72 | C1GJ14 | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | Uncharacterized protein. | 0.823 |
PADG_01620 | LSM5 | C1G3V4 | C1GN72 | Uncharacterized protein. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.984 |
PADG_01620 | PADG_02530 | C1G3V4 | C1G5S5 | Uncharacterized protein. | Small nuclear ribonucleoprotein G. | 0.979 |
PADG_01620 | PADG_03214 | C1G3V4 | C1G7Q9 | Uncharacterized protein. | Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.988 |
PADG_01620 | PADG_03644 | C1G3V4 | C1G8Q8 | Uncharacterized protein. | RRM domain-containing protein. | 0.819 |
PADG_01620 | PADG_04077 | C1G3V4 | C1G9Z1 | Uncharacterized protein. | Uncharacterized protein. | 0.944 |
PADG_01620 | PADG_04301 | C1G3V4 | C1GAL5 | Uncharacterized protein. | WD_REPEATS_REGION domain-containing protein. | 0.871 |
PADG_01620 | PADG_04762-2 | C1G3V4 | A0A0A0HX85 | Uncharacterized protein. | SNRNP27 domain-containing protein. | 0.683 |
PADG_01620 | PADG_06734 | C1G3V4 | C1GHJ8 | Uncharacterized protein. | Sm domain-containing protein. | 0.985 |
PADG_01620 | PADG_06856 | C1G3V4 | C1GHX0 | Uncharacterized protein. | Small nuclear ribonucleoprotein Sm D2. | 0.981 |
PADG_02530 | LSM5 | C1G5S5 | C1GN72 | Small nuclear ribonucleoprotein G. | U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. | 0.957 |
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