Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PADG_01790 | PADG_02489 | C1G4C4 | C1G5N4 | Uncharacterized protein. | Brix domain-containing protein. | 0.478 |
PADG_01790 | PADG_02783 | C1G4C4 | C1G6H8 | Uncharacterized protein. | Uncharacterized protein. | 0.503 |
PADG_01790 | PADG_07655 | C1G4C4 | C1GK69 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.999 |
PADG_02007-2 | PADG_02783 | A0A0A0HYT2 | C1G6H8 | Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. | Uncharacterized protein. | 0.599 |
PADG_02007-2 | PADG_06468 | A0A0A0HYT2 | C1GGN1 | Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. | Uncharacterized protein. | 0.999 |
PADG_02007-2 | PADG_07899 | A0A0A0HYT2 | C1GLB3 | Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. | Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family. | 0.999 |
PADG_02489 | PADG_01790 | C1G5N4 | C1G4C4 | Brix domain-containing protein. | Uncharacterized protein. | 0.478 |
PADG_02489 | PADG_02783 | C1G5N4 | C1G6H8 | Brix domain-containing protein. | Uncharacterized protein. | 0.543 |
PADG_02489 | PADG_03195 | C1G5N4 | C1G7P0 | Brix domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.911 |
PADG_02489 | PADG_04546 | C1G5N4 | C1GC24 | Brix domain-containing protein. | RRM domain-containing protein. | 0.997 |
PADG_02489 | PADG_07655 | C1G5N4 | C1GK69 | Brix domain-containing protein. | RPOLD domain-containing protein. | 0.841 |
PADG_02489 | PADG_07837 | C1G5N4 | C1GL51 | Brix domain-containing protein. | ATP-dependent RNA helicase DBP3; Belongs to the DEAD box helicase family. | 0.860 |
PADG_02783 | PADG_01790 | C1G6H8 | C1G4C4 | Uncharacterized protein. | Uncharacterized protein. | 0.503 |
PADG_02783 | PADG_02007-2 | C1G6H8 | A0A0A0HYT2 | Uncharacterized protein. | Signal recognition particle subunit SRP72; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP72 family. | 0.599 |
PADG_02783 | PADG_02489 | C1G6H8 | C1G5N4 | Uncharacterized protein. | Brix domain-containing protein. | 0.543 |
PADG_02783 | PADG_03195 | C1G6H8 | C1G7P0 | Uncharacterized protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.566 |
PADG_02783 | PADG_04546 | C1G6H8 | C1GC24 | Uncharacterized protein. | RRM domain-containing protein. | 0.542 |
PADG_02783 | PADG_06468 | C1G6H8 | C1GGN1 | Uncharacterized protein. | Uncharacterized protein. | 0.521 |
PADG_02783 | PADG_07655 | C1G6H8 | C1GK69 | Uncharacterized protein. | RPOLD domain-containing protein. | 0.552 |
PADG_02783 | PADG_07700 | C1G6H8 | C1GKB4 | Uncharacterized protein. | Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family. | 0.678 |
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