STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PADG_05564Porphobilinogen deaminase. (347 aa)    
Predicted Functional Partners:
PADG_02384
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 0.998
PADG_04879
HEM4 domain-containing protein.
  
 0.998
PADG_06052
Uncharacterized protein; Belongs to the precorrin methyltransferase family.
 
 0.988
PADG_04032
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 0.974
PADG_07214
Uncharacterized protein.
  
 
 0.882
PADG_02701
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.756
PADG_06050
FSH1 domain-containing protein.
    
 0.714
PADG_08108
Uncharacterized protein.
  
  
 0.708
PADG_03697
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
  
  
 0.707
PADG_08674
DHFR domain-containing protein; Belongs to the dihydrofolate reductase family.
  
 
 0.681
Your Current Organism:
Paracoccidioides brasiliensis
NCBI taxonomy Id: 502780
Other names: P. brasiliensis Pb18, Paracoccidioides brasiliensis Pb18
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