Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2J93_1171 | B2J93_1212 | A0A218YUK8 | A0A218ZEP9 | DNA ligase. | ATP-dependent DNA helicase II subunit. | 0.985 |
B2J93_1171 | B2J93_2707 | A0A218YUK8 | A0A218Z367 | DNA ligase. | SAP domain-containing protein. | 0.988 |
B2J93_1171 | B2J93_7111 | A0A218YUK8 | A0A218YU03 | DNA ligase. | Uncharacterized protein. | 0.897 |
B2J93_1212 | B2J93_1171 | A0A218ZEP9 | A0A218YUK8 | ATP-dependent DNA helicase II subunit. | DNA ligase. | 0.985 |
B2J93_1212 | B2J93_2707 | A0A218ZEP9 | A0A218Z367 | ATP-dependent DNA helicase II subunit. | SAP domain-containing protein. | 0.999 |
B2J93_1212 | B2J93_7111 | A0A218ZEP9 | A0A218YU03 | ATP-dependent DNA helicase II subunit. | Uncharacterized protein. | 0.974 |
B2J93_2707 | B2J93_1171 | A0A218Z367 | A0A218YUK8 | SAP domain-containing protein. | DNA ligase. | 0.988 |
B2J93_2707 | B2J93_1212 | A0A218Z367 | A0A218ZEP9 | SAP domain-containing protein. | ATP-dependent DNA helicase II subunit. | 0.999 |
B2J93_2707 | B2J93_7111 | A0A218Z367 | A0A218YU03 | SAP domain-containing protein. | Uncharacterized protein. | 0.968 |
B2J93_2851 | B2J93_2931 | A0A218Z048 | A0A218Z1U4 | DUF3453 domain-containing protein. | Fip1 domain-containing protein. | 0.995 |
B2J93_2851 | B2J93_4030 | A0A218Z048 | A0A218Z9U1 | DUF3453 domain-containing protein. | Uncharacterized protein. | 0.998 |
B2J93_2851 | B2J93_7111 | A0A218Z048 | A0A218YU03 | DUF3453 domain-containing protein. | Uncharacterized protein. | 0.932 |
B2J93_2851 | B2J93_7408 | A0A218Z048 | A0A218Z701 | DUF3453 domain-containing protein. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.991 |
B2J93_2851 | B2J93_9032 | A0A218Z048 | A0A218ZIU4 | DUF3453 domain-containing protein. | YTH domain-containing protein. | 0.983 |
B2J93_2851 | B2J93_9142 | A0A218Z048 | A0A218YU30 | DUF3453 domain-containing protein. | Uncharacterized protein. | 0.990 |
B2J93_2851 | B2J93_9149 | A0A218Z048 | A0A218YT40 | DUF3453 domain-containing protein. | CPSF_A domain-containing protein. | 0.998 |
B2J93_2931 | B2J93_2851 | A0A218Z1U4 | A0A218Z048 | Fip1 domain-containing protein. | DUF3453 domain-containing protein. | 0.995 |
B2J93_2931 | B2J93_4030 | A0A218Z1U4 | A0A218Z9U1 | Fip1 domain-containing protein. | Uncharacterized protein. | 0.998 |
B2J93_2931 | B2J93_7111 | A0A218Z1U4 | A0A218YU03 | Fip1 domain-containing protein. | Uncharacterized protein. | 0.916 |
B2J93_2931 | B2J93_7408 | A0A218Z1U4 | A0A218Z701 | Fip1 domain-containing protein. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.996 |
page 1 of 4