STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_7102WD repeat-containing protein. (332 aa)    
Predicted Functional Partners:
B2J93_7103
Uncharacterized protein.
 
      0.679
B2J93_9186
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
   
    0.580
B2J93_4155
Utp12 domain-containing protein.
   
    0.567
B2J93_5295
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
    0.539
B2J93_2839
Ribosome bioproteinsis protein.
   
    0.514
B2J93_575
Sas10 domain-containing protein.
   
    0.514
B2J93_1327
WD repeat-containing protein.
   
    0.493
B2J93_3684
Nucleolar complex protein.
   
    0.442
B2J93_2727
Transcription factor Utp.
   
    0.416
B2J93_8638
Uncharacterized protein.
   
 
 0.405
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.