STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_115050S ribosomal protein L. (249 aa)    
Predicted Functional Partners:
B2J93_9455
Uncharacterized protein.
  
 0.997
B2J93_6952
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.997
B2J93_2590
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.997
B2J93_5220
Uncharacterized protein.
  
 0.997
B2J93_6443
Uncharacterized protein.
  
 0.997
B2J93_3395
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.997
B2J93_5678
Uncharacterized protein.
  
 0.997
B2J93_1657
Ribosomal protein S.
   
 0.997
B2J93_8828
Mitochondrial large ribosomal subunit; Belongs to the universal ribosomal protein uL22 family.
  
 0.997
B2J93_8854
50S ribosomal protein L; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.997
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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