STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_5845Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. (755 aa)    
Predicted Functional Partners:
B2J93_1393
BRRG2, Response regulator.
    
 0.961
B2J93_5573
Nsp1_C domain-containing protein.
     
 0.957
B2J93_379
Hist_deacetyl domain-containing protein.
  
 
 
0.923
B2J93_8013
WD_REPEATS_REGION domain-containing protein.
   
 0.922
B2J93_4943
Histone H2B; Belongs to the histone H2B family.
    
 0.907
B2J93_4944
Histone H2A; Belongs to the histone H2A family.
    
 0.892
B2J93_1644
Uncharacterized protein.
    
 0.862
B2J93_3252
Uncharacterized protein.
    
 0.814
B2J93_6362
Uncharacterized protein.
    
 0.806
B2J93_623
Histone domain-containing protein.
    
 0.782
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
Server load: low (18%) [HD]