STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_7113Uncharacterized protein. (653 aa)    
Predicted Functional Partners:
B2J93_5405
Uncharacterized protein.
    
 0.998
B2J93_7302
SGF29 C-terminal domain-containing protein.
    
 0.995
B2J93_8029
TAF domain-containing protein.
   
 0.995
B2J93_791
WD_REPEATS_REGION domain-containing protein.
    
 0.995
B2J93_4922
Bromo domain-containing protein.
    
 0.995
B2J93_9341
Uncharacterized protein.
    
 0.994
B2J93_7129
Uncharacterized protein.
    
 0.992
B2J93_5106
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 0.991
B2J93_712
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.989
B2J93_431
USP domain-containing protein; Belongs to the peptidase C19 family.
    
 0.988
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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