STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_199Uncharacterized protein. (706 aa)    
Predicted Functional Partners:
B2J93_575
Sas10 domain-containing protein.
   
 0.996
B2J93_7879
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.989
B2J93_4903
U3 small nucleolar RNA-associated protein 22.
   
 0.988
B2J93_1160
Uncharacterized protein.
   
 0.985
B2J93_4622
Uncharacterized protein.
   
 
 0.978
B2J93_2746
Uncharacterized protein.
   
 0.972
B2J93_7221
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.967
B2J93_4765
Uncharacterized protein.
   
 0.965
B2J93_2993
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
0.964
B2J93_1648
WD_REPEATS_REGION domain-containing protein.
   
 0.964
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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