STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_3958SH3 domain-containing protein. (1157 aa)    
Predicted Functional Partners:
B2J93_5573
Nsp1_C domain-containing protein.
   
 0.993
B2J93_7687
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.905
B2J93_3000
Uncharacterized protein.
   
 0.866
B2J93_948
Uncharacterized protein.
    
 0.845
B2J93_5413
Uncharacterized protein.
   
 0.840
B2J93_4991
Peptidyl-prolyl cis-trans isomerase.
   
 0.838
B2J93_7659
Uncharacterized protein.
  
 
 0.834
B2J93_1464
WD_REPEATS_REGION domain-containing protein.
    
 0.827
B2J93_9287
Tryptophan synthase.
   
 
 0.827
B2J93_2541
Uncharacterized protein.
   
 0.820
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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