STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_3800Amb_all domain-containing protein. (358 aa)    
Predicted Functional Partners:
B2J93_8255
Uncharacterized protein.
    
 0.780
B2J93_6854
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.780
B2J93_781
Zf-rbx1 domain-containing protein.
    
 0.779
B2J93_7887
Cullin; Belongs to the cullin family.
    
 0.749
B2J93_5165
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.749
B2J93_1313
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
 0.712
B2J93_531
Ubiquitin-like domain-containing protein.
    
 0.707
B2J93_7550
Pectate lyase.
  
  
 0.692
B2J93_5276
Uncharacterized protein.
    
 0.684
B2J93_5819
Ubiquitin-like domain-containing protein.
    
 0.684
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.