STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_539RRM domain-containing protein. (332 aa)    
Predicted Functional Partners:
B2J93_5704
TPR_REGION domain-containing protein.
   
 0.998
B2J93_2006
Uncharacterized protein.
   
 0.992
B2J93_9149
CPSF_A domain-containing protein.
    
 0.991
B2J93_2572
CID domain-containing protein.
    
 0.989
CLP1
mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.
   
 0.989
B2J93_4030
Uncharacterized protein.
   
 0.988
B2J93_3038
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.988
B2J93_2851
DUF3453 domain-containing protein.
   
 0.987
B2J93_2931
Fip1 domain-containing protein.
    
 0.986
B2J93_7408
Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.
    
 0.985
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.