STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_256726S proteasome regulatory subunit rpn. (352 aa)    
Predicted Functional Partners:
B2J93_2907
26S protease regulatory subunit; Belongs to the AAA ATPase family.
   
 0.999
B2J93_5669
VWFA domain-containing protein.
   
 0.999
B2J93_434
PCI domain-containing protein.
   
 0.999
B2J93_5526
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
B2J93_49
26S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.999
B2J93_3030
26S protease regulatory subunit 6A; Belongs to the AAA ATPase family.
   
 0.999
B2J93_7490
Proteasome subunit alpha type.
   
 0.999
B2J93_3641
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 0.999
B2J93_176
26S proteasome non-ATPase regulatory subunit.
   
 0.999
B2J93_378
26S proteasome regulatory subunit.
   
0.999
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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