STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_6544RING-type domain-containing protein. (970 aa)    
Predicted Functional Partners:
B2J93_9032
YTH domain-containing protein.
   
 0.971
B2J93_9149
CPSF_A domain-containing protein.
    
 0.940
B2J93_6591
WD_REPEATS_REGION domain-containing protein.
   
 0.940
B2J93_3038
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.940
B2J93_2006
Uncharacterized protein.
    
 0.940
B2J93_2931
Fip1 domain-containing protein.
    
 0.933
B2J93_9142
Uncharacterized protein.
    
 0.928
B2J93_1049
WD repeat-containing protein.
    
 0.928
B2J93_4837
Uncharacterized protein.
    
 0.916
B2J93_4030
Uncharacterized protein.
    
 0.869
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.