STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_3222Fibronectin type-III domain-containing protein. (1142 aa)    
Predicted Functional Partners:
B2J93_1709
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
  
 
 0.798
B2J93_8907
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
    
 0.617
B2J93_9287
Tryptophan synthase.
  
  
 0.585
B2J93_6123
Uncharacterized protein.
    
 0.584
B2J93_8046
Uncharacterized protein.
     
 0.583
B2J93_4987
Biotin synthase.
   
 
  0.576
B2J93_1291
N-acetyltransferase domain-containing protein; In the N-terminal section; belongs to the acetylglutamate kinase family.
   
  
 0.486
B2J93_8489
4-aminobutyrate aminotransferase (GABA transaminase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.480
B2J93_8447
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 
  0.480
B2J93_8543
Uncharacterized protein; Belongs to the arginase family.
    
 0.471
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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