STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_3478Fumarylacetoacetase. (434 aa)    
Predicted Functional Partners:
B2J93_9293
Uncharacterized protein.
  
 
 0.923
B2J93_3485
Homogentisate 1,2-dioxygenase.
 
 
 0.913
B2J93_4611
FAA_hydrolase domain-containing protein.
     
 0.895
B2J93_3630
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
 0.845
B2J93_231
Uncharacterized protein.
   
 0.839
B2J93_4571
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
  
 
  0.824
B2J93_5088
Succinate dehydrogenase cytochrome b subunit.
   
 
  0.817
B2J93_2916
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.774
B2J93_9349
Uncharacterized protein.
   
 0.724
B2J93_242
Malate synthase; Belongs to the malate synthase family.
  
 
 0.685
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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