STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_6487Uncharacterized protein; Belongs to the DEAD box helicase family. (534 aa)    
Predicted Functional Partners:
B2J93_575
Sas10 domain-containing protein.
   
 0.990
B2J93_2631
Uncharacterized protein.
   
 0.989
B2J93_4903
U3 small nucleolar RNA-associated protein 22.
   
 0.981
B2J93_3597
RRM domain-containing protein.
   
 
 0.974
B2J93_3193
WD_REPEATS_REGION domain-containing protein.
   
 0.960
B2J93_199
Uncharacterized protein.
  
0.950
B2J93_7843
Uncharacterized protein.
   
 0.950
B2J93_8638
Uncharacterized protein.
   
 
 0.946
B2J93_4155
Utp12 domain-containing protein.
   
 0.943
SPB1
AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily.
   
 0.943
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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