STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_7499Uncharacterized protein. (536 aa)    
Predicted Functional Partners:
B2J93_4447
Nucleotide excision repair protein RAD.
    
 
 0.942
B2J93_2291
Rab-GAP TBC domain-containing protein.
    
 
 0.923
B2J93_417
Ubiquitin-like domain-containing protein.
    
 
 0.797
B2J93_4183
Transcription factor bZIP.
    
 
 0.797
B2J93_7933
Uncharacterized protein.
   
 
 0.783
B2J93_5276
Uncharacterized protein.
    
 
 0.781
B2J93_5819
Ubiquitin-like domain-containing protein.
    
 
 0.781
B2J93_6719
Uncharacterized protein.
    
 
 0.781
B2J93_4883
Ubiquitin-like domain-containing protein.
   
   0.762
B2J93_4884
60S ribosomal protein L.
   
   0.762
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.