Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2J93_1608 | B2J93_3585 | A0A218YVY6 | A0A218Z3R6 | Malate dehydrogenase. | Malate dehydrogenase. | 0.820 |
B2J93_1608 | B2J93_3985 | A0A218YVY6 | A0A218YSP3 | Malate dehydrogenase. | FAD dependent oxidoreductase superfamily. | 0.626 |
B2J93_1608 | B2J93_5367 | A0A218YVY6 | A0A218YZS9 | Malate dehydrogenase. | DAO domain-containing protein. | 0.626 |
B2J93_1608 | B2J93_6641 | A0A218YVY6 | A0A218Z631 | Malate dehydrogenase. | SCP domain-containing protein. | 0.443 |
B2J93_1608 | B2J93_7266 | A0A218YVY6 | A0A218ZCG9 | Malate dehydrogenase. | Uncharacterized protein. | 0.790 |
B2J93_1608 | B2J93_7455 | A0A218YVY6 | A0A218Z5V8 | Malate dehydrogenase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.913 |
B2J93_1608 | B2J93_9010 | A0A218YVY6 | A0A218ZHT8 | Malate dehydrogenase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.908 |
B2J93_2644 | B2J93_6641 | A0A218Z6V6 | A0A218Z631 | Beta-hexosaminidase. | SCP domain-containing protein. | 0.441 |
B2J93_3585 | B2J93_1608 | A0A218Z3R6 | A0A218YVY6 | Malate dehydrogenase. | Malate dehydrogenase. | 0.820 |
B2J93_3585 | B2J93_3985 | A0A218Z3R6 | A0A218YSP3 | Malate dehydrogenase. | FAD dependent oxidoreductase superfamily. | 0.626 |
B2J93_3585 | B2J93_5367 | A0A218Z3R6 | A0A218YZS9 | Malate dehydrogenase. | DAO domain-containing protein. | 0.626 |
B2J93_3585 | B2J93_6641 | A0A218Z3R6 | A0A218Z631 | Malate dehydrogenase. | SCP domain-containing protein. | 0.443 |
B2J93_3585 | B2J93_7266 | A0A218Z3R6 | A0A218ZCG9 | Malate dehydrogenase. | Uncharacterized protein. | 0.790 |
B2J93_3585 | B2J93_7455 | A0A218Z3R6 | A0A218Z5V8 | Malate dehydrogenase. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.913 |
B2J93_3585 | B2J93_9010 | A0A218Z3R6 | A0A218ZHT8 | Malate dehydrogenase. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.908 |
B2J93_3985 | B2J93_1608 | A0A218YSP3 | A0A218YVY6 | FAD dependent oxidoreductase superfamily. | Malate dehydrogenase. | 0.626 |
B2J93_3985 | B2J93_3585 | A0A218YSP3 | A0A218Z3R6 | FAD dependent oxidoreductase superfamily. | Malate dehydrogenase. | 0.626 |
B2J93_3985 | B2J93_6641 | A0A218YSP3 | A0A218Z631 | FAD dependent oxidoreductase superfamily. | SCP domain-containing protein. | 0.451 |
B2J93_3985 | B2J93_7266 | A0A218YSP3 | A0A218ZCG9 | FAD dependent oxidoreductase superfamily. | Uncharacterized protein. | 0.604 |
B2J93_3985 | B2J93_9010 | A0A218YSP3 | A0A218ZHT8 | FAD dependent oxidoreductase superfamily. | Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second. | 0.604 |
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