STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_2203Uncharacterized protein. (491 aa)    
Predicted Functional Partners:
B2J93_3273
Uncharacterized protein.
   
 
 0.679
B2J93_3496
Uncharacterized protein.
   
 
 0.646
B2J93_2198
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
    
  0.556
B2J93_4744
Protein MAK16; Belongs to the MAK16 family.
   
   0.517
B2J93_9295
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
   0.515
B2J93_3701
60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family.
   
   0.509
B2J93_8253
Uncharacterized protein.
   
 
 0.508
B2J93_1193
40S ribosomal protein S; Belongs to the universal ribosomal protein uS3 family.
   
   0.496
B2J93_6384
Ribos_L4_asso_C domain-containing protein.
   
   0.494
B2J93_4702
Uncharacterized protein.
   
   0.494
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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