STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_3018Exonuclease rnase t and DNA polymerase iii. (190 aa)    
Predicted Functional Partners:
B2J93_3642
Exonuclease domain-containing protein.
   
 0.917
B2J93_7294
C2H2-type domain-containing protein.
   
 0.842
B2J93_3166
RNA exonuclease Rex.
   
 0.842
B2J93_3820
Exonuclease domain-containing protein.
   
 0.770
B2J93_3019
Phosphoglucomutase.
 
    
 0.731
B2J93_6325
Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins.
   
 0.660
B2J93_1539
PAB-dependent poly(A)-specific ribonuclease subunit PAN.
   
 0.622
B2J93_1514
Uncharacterized protein.
      
 0.539
B2J93_1184
tRNA processing endoribonuclease Trz.
      
 0.539
B2J93_7430
Uncharacterized protein.
      
 0.453
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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