STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_2679TMF_TATA_bd domain-containing protein. (886 aa)    
Predicted Functional Partners:
B2J93_139
Ras-related protein Rab-6A.
    
 0.830
B2J93_8017
GARP complex component (Vps54).
   
 
 0.724
B2J93_420
Uncharacterized protein.
   
 
  0.721
B2J93_330
Uncharacterized protein.
     
 0.720
B2J93_3294
Uncharacterized protein.
     
 0.714
B2J93_4886
Uncharacterized protein.
     
 0.701
B2J93_4028
Vps53_N domain-containing protein.
     
 0.701
B2J93_5186
Component of oligomeric golgi complex.
     
 0.701
B2J93_6466
Uncharacterized protein.
     
 0.700
B2J93_1175
ADP-ribosylation factor family protein.
     
 0.699
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.