Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2J93_2389 | B2J93_2501 | A0A218Z349 | A0A218ZFD8 | Chorismate synthase. | Anthranilate phosphoribosyltransferase. | 0.951 |
B2J93_2389 | B2J93_4296 | A0A218Z349 | A0A218YXK7 | Chorismate synthase. | Anthranilate synthase component I. | 0.914 |
B2J93_2389 | B2J93_4730 | A0A218Z349 | A0A218Z2L6 | Chorismate synthase. | Glutamine amidotransferase type-1 domain-containing protein. | 0.895 |
B2J93_2389 | B2J93_6159 | A0A218Z349 | A0A218ZI90 | Chorismate synthase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.967 |
B2J93_2389 | B2J93_6940 | A0A218Z349 | A0A218YY42 | Chorismate synthase. | D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.542 |
B2J93_2389 | B2J93_7128 | A0A218Z349 | A0A218YUG5 | Chorismate synthase. | PRA-CH domain-containing protein. | 0.732 |
B2J93_2389 | B2J93_735 | A0A218Z349 | A0A218YYC4 | Chorismate synthase. | Aspartokinase. | 0.629 |
B2J93_2389 | B2J93_7534 | A0A218Z349 | A0A218Z8K1 | Chorismate synthase. | 3-oxoadipate enol-lactone hydrolase. | 0.952 |
B2J93_2389 | B2J93_7599 | A0A218Z349 | A0A218Z677 | Chorismate synthase. | Histidinol-phosphate aminotransferase. | 0.904 |
B2J93_2389 | B2J93_9287 | A0A218Z349 | A0A218Z821 | Chorismate synthase. | Tryptophan synthase. | 0.983 |
B2J93_2501 | B2J93_2389 | A0A218ZFD8 | A0A218Z349 | Anthranilate phosphoribosyltransferase. | Chorismate synthase. | 0.951 |
B2J93_2501 | B2J93_4296 | A0A218ZFD8 | A0A218YXK7 | Anthranilate phosphoribosyltransferase. | Anthranilate synthase component I. | 0.997 |
B2J93_2501 | B2J93_4730 | A0A218ZFD8 | A0A218Z2L6 | Anthranilate phosphoribosyltransferase. | Glutamine amidotransferase type-1 domain-containing protein. | 0.990 |
B2J93_2501 | B2J93_6159 | A0A218ZFD8 | A0A218ZI90 | Anthranilate phosphoribosyltransferase. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.999 |
B2J93_2501 | B2J93_7128 | A0A218ZFD8 | A0A218YUG5 | Anthranilate phosphoribosyltransferase. | PRA-CH domain-containing protein. | 0.964 |
B2J93_2501 | B2J93_735 | A0A218ZFD8 | A0A218YYC4 | Anthranilate phosphoribosyltransferase. | Aspartokinase. | 0.661 |
B2J93_2501 | B2J93_7534 | A0A218ZFD8 | A0A218Z8K1 | Anthranilate phosphoribosyltransferase. | 3-oxoadipate enol-lactone hydrolase. | 0.993 |
B2J93_2501 | B2J93_7599 | A0A218ZFD8 | A0A218Z677 | Anthranilate phosphoribosyltransferase. | Histidinol-phosphate aminotransferase. | 0.893 |
B2J93_2501 | B2J93_9287 | A0A218ZFD8 | A0A218Z821 | Anthranilate phosphoribosyltransferase. | Tryptophan synthase. | 0.998 |
B2J93_4296 | B2J93_2389 | A0A218YXK7 | A0A218Z349 | Anthranilate synthase component I. | Chorismate synthase. | 0.914 |
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