STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_6000Uncharacterized protein. (86 aa)    
Predicted Functional Partners:
B2J93_1351
Uncharacterized protein.
   
   0.574
B2J93_7843
Uncharacterized protein.
   
   0.555
B2J93_5063
Periodic tryptophan protein.
   
   0.555
B2J93_6773
WD_REPEATS_REGION domain-containing protein.
   
   0.554
B2J93_4903
U3 small nucleolar RNA-associated protein 22.
   
   0.554
B2J93_8638
Uncharacterized protein.
   
   0.543
B2J93_3193
WD_REPEATS_REGION domain-containing protein.
   
   0.543
B2J93_4622
Uncharacterized protein.
   
   0.542
B2J93_1253
WD repeat-containing protein.
   
   0.540
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
   0.539
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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