STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_1380DNA mismatch repair protein msh; Component of the post-replicative DNA mismatch repair system (MMR). (916 aa)    
Predicted Functional Partners:
B2J93_6347
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.997
B2J93_7871
Uncharacterized protein.
 
 0.995
B2J93_9249
DNA_mis_repair domain-containing protein.
 
 0.995
B2J93_8108
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
0.992
B2J93_8109
Uncharacterized protein.
   
 0.991
B2J93_1413
Exonuclease.
   
 0.989
B2J93_2304
Uncharacterized protein.
 
 0.977
B2J93_2626
Vezatin domain-containing protein.
   
 0.951
B2J93_838
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.951
B2J93_2414
DNA mismatch repair protein.
  
 0.939
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.