STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_4887Rab-GAP TBC domain-containing protein. (409 aa)    
Predicted Functional Partners:
B2J93_9548
Uncharacterized protein.
    
 0.972
B2J93_1959
Uncharacterized protein.
    
 0.664
B2J93_4882
Protein YIP.
 
      0.650
B2J93_5296
GTPase-activating protein gyp.
   
 
 0.539
B2J93_446
Rab-GAP TBC domain-containing protein.
      
 0.517
B2J93_4752
Rab-GAP TBC domain-containing protein.
      
 0.515
B2J93_5216
Fe_hyd_lg_C domain-containing protein; Belongs to the NARF family.
   
  
 0.480
B2J93_6498
Ras-related protein Rab.
      
 0.454
B2J93_5111
Cell division cycle protein.
      
 0.447
B2J93_9298
GTPase-activating protein GYP.
      
 0.445
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.