STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_8043RNase III domain-containing protein. (259 aa)    
Predicted Functional Partners:
B2J93_3422
Mitochondrial ribosomal protein.
   
   0.933
B2J93_7540
60S ribosomal protein L.
   
 
 0.875
B2J93_5678
Uncharacterized protein.
   
   0.840
B2J93_8969
Uncharacterized protein.
   
 
 0.830
B2J93_4280
Uncharacterized protein.
   
   0.815
B2J93_1149
Uncharacterized protein.
   
 
 0.805
B2J93_3127
cobW domain-containing protein.
   
 
 0.790
B2J93_793
Uncharacterized protein.
   
   0.772
B2J93_2035
Ribosomal_L18e/L15P domain-containing protein.
   
   0.766
B2J93_9589
MRP-L46 domain-containing protein.
   
 
 0.760
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.