STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_4199Uncharacterized protein. (826 aa)    
Predicted Functional Partners:
B2J93_3794
Casein kinase II; Belongs to the protein kinase superfamily.
   
 0.991
B2J93_504
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
 
0.987
B2J93_4132
Uncharacterized protein.
    
 0.977
B2J93_4903
U3 small nucleolar RNA-associated protein 22.
   
 0.971
B2J93_4169
Uncharacterized protein.
    
  0.966
B2J93_2334
Uncharacterized protein.
    
  0.948
B2J93_2727
Transcription factor Utp.
   
 
 0.939
B2J93_8300
S4 RNA-binding domain-containing protein.
   
   0.922
B2J93_3875
Brix domain-containing protein.
    
   0.921
B2J93_4382
PINc domain-containing protein.
    
   0.921
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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