STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_959Vacuolar fusion protein mon. (660 aa)    
Predicted Functional Partners:
B2J93_3845
Uncharacterized protein.
    
 0.998
B2J93_8319
Vacuolar assembly protein.
    
 
 0.966
B2J93_1164
GTPase Rab.
    
 0.962
B2J93_8698
Uncharacterized protein.
    
 0.895
B2J93_8699
Secretion related Rab/GTPase.
    
 0.895
B2J93_7001
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.801
B2J93_3992
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.773
B2J93_6809
Vacuolar protein sorting protein DigA.
  
 
 
 0.741
B2J93_3156
Vacuolar morphoproteinsis protein AvaB.
   
 
 0.735
B2J93_3384
E3 ubiquitin-protein ligase PEP5.
    
 
 0.727
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.