Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2J93_1236 | B2J93_3684 | A0A218Z3K1 | A0A218Z4Y6 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Nucleolar complex protein. | 0.995 |
B2J93_1236 | B2J93_4155 | A0A218Z3K1 | A0A218YTP8 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | Utp12 domain-containing protein. | 0.992 |
B2J93_1236 | B2J93_4382 | A0A218Z3K1 | A0A218Z3A8 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | PINc domain-containing protein. | 0.997 |
B2J93_1236 | B2J93_6991 | A0A218Z3K1 | A0A218ZCF0 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | DRIM domain-containing protein. | 0.992 |
B2J93_1236 | B2J93_9295 | A0A218Z3K1 | A0A218Z815 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.983 |
B2J93_1236 | B2J93_950 | A0A218Z3K1 | A0A218ZDL5 | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | AB hydrolase-1 domain-containing protein. | 0.664 |
B2J93_185 | B2J93_4283 | A0A218Z7A9 | A0A218YYM1 | Cytochrome b5 heme-binding domain-containing protein. | Uncharacterized protein. | 0.508 |
B2J93_185 | B2J93_7070 | A0A218Z7A9 | A0A218ZFY5 | Cytochrome b5 heme-binding domain-containing protein. | Uncharacterized protein. | 0.514 |
B2J93_185 | B2J93_7455 | A0A218Z7A9 | A0A218Z5V8 | Cytochrome b5 heme-binding domain-containing protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.968 |
B2J93_185 | B2J93_950 | A0A218Z7A9 | A0A218ZDL5 | Cytochrome b5 heme-binding domain-containing protein. | AB hydrolase-1 domain-containing protein. | 0.851 |
B2J93_3684 | B2J93_1236 | A0A218Z4Y6 | A0A218Z3K1 | Nucleolar complex protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.995 |
B2J93_3684 | B2J93_4155 | A0A218Z4Y6 | A0A218YTP8 | Nucleolar complex protein. | Utp12 domain-containing protein. | 0.998 |
B2J93_3684 | B2J93_4382 | A0A218Z4Y6 | A0A218Z3A8 | Nucleolar complex protein. | PINc domain-containing protein. | 0.989 |
B2J93_3684 | B2J93_6991 | A0A218Z4Y6 | A0A218ZCF0 | Nucleolar complex protein. | DRIM domain-containing protein. | 0.997 |
B2J93_3684 | B2J93_9295 | A0A218Z4Y6 | A0A218Z815 | Nucleolar complex protein. | 40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.983 |
B2J93_3684 | B2J93_950 | A0A218Z4Y6 | A0A218ZDL5 | Nucleolar complex protein. | AB hydrolase-1 domain-containing protein. | 0.664 |
B2J93_4155 | B2J93_1236 | A0A218YTP8 | A0A218Z3K1 | Utp12 domain-containing protein. | U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. | 0.992 |
B2J93_4155 | B2J93_3684 | A0A218YTP8 | A0A218Z4Y6 | Utp12 domain-containing protein. | Nucleolar complex protein. | 0.998 |
B2J93_4155 | B2J93_4382 | A0A218YTP8 | A0A218Z3A8 | Utp12 domain-containing protein. | PINc domain-containing protein. | 0.988 |
B2J93_4155 | B2J93_6991 | A0A218YTP8 | A0A218ZCF0 | Utp12 domain-containing protein. | DRIM domain-containing protein. | 0.994 |
page 1 of 4