STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_9184Glutamate decarboxylase; Belongs to the group II decarboxylase family. (509 aa)    
Predicted Functional Partners:
B2J93_7128
PRA-CH domain-containing protein.
    
 0.862
B2J93_8489
4-aminobutyrate aminotransferase (GABA transaminase); Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.858
B2J93_9287
Tryptophan synthase.
    
 0.849
B2J93_7058
Sphingosine-1-phosphate phosphohydrolase.
    
 0.804
B2J93_3601
Uncharacterized protein.
  
 
 0.791
B2J93_6465
NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
 0.775
B2J93_226
Uncharacterized protein.
   
    0.769
B2J93_7455
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
  0.758
B2J93_185
Cytochrome b5 heme-binding domain-containing protein.
   
  0.758
B2J93_9061
Cytochrome b5 heme-binding domain-containing protein; Belongs to the cytochrome b5 family.
   
  0.753
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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