Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
B2J93_3684 | B2J93_4910 | A0A218Z4Y6 | A0A218ZEW5 | Nucleolar complex protein. | MI domain-containing protein. | 0.959 |
B2J93_3684 | B2J93_575 | A0A218Z4Y6 | A0A218ZCK6 | Nucleolar complex protein. | Sas10 domain-containing protein. | 0.998 |
B2J93_3684 | B2J93_6600 | A0A218Z4Y6 | A0A218YUP4 | Nucleolar complex protein. | WD_REPEATS_REGION domain-containing protein. | 0.996 |
B2J93_3684 | B2J93_6955 | A0A218Z4Y6 | A0A218YVV2 | Nucleolar complex protein. | Uncharacterized protein. | 0.851 |
B2J93_3684 | B2J93_7038 | A0A218Z4Y6 | A0A218Z2Q2 | Nucleolar complex protein. | Pre-rRNA-processing protein ESF. | 0.783 |
B2J93_3684 | B2J93_7843 | A0A218Z4Y6 | A0A218ZBQ0 | Nucleolar complex protein. | Uncharacterized protein. | 0.998 |
B2J93_3684 | B2J93_7879 | A0A218Z4Y6 | A0A218ZE31 | Nucleolar complex protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.998 |
B2J93_3684 | B2J93_9393 | A0A218Z4Y6 | A0A218ZAL5 | Nucleolar complex protein. | Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | 0.708 |
B2J93_3684 | B2J93_98 | A0A218Z4Y6 | A0A218Z588 | Nucleolar complex protein. | RNA helicase. | 0.712 |
B2J93_3684 | NAT10 | A0A218Z4Y6 | A0A218Z9F4 | Nucleolar complex protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.994 |
B2J93_4910 | B2J93_3684 | A0A218ZEW5 | A0A218Z4Y6 | MI domain-containing protein. | Nucleolar complex protein. | 0.959 |
B2J93_4910 | B2J93_575 | A0A218ZEW5 | A0A218ZCK6 | MI domain-containing protein. | Sas10 domain-containing protein. | 0.962 |
B2J93_4910 | B2J93_6600 | A0A218ZEW5 | A0A218YUP4 | MI domain-containing protein. | WD_REPEATS_REGION domain-containing protein. | 0.977 |
B2J93_4910 | B2J93_6955 | A0A218ZEW5 | A0A218YVV2 | MI domain-containing protein. | Uncharacterized protein. | 0.958 |
B2J93_4910 | B2J93_7038 | A0A218ZEW5 | A0A218Z2Q2 | MI domain-containing protein. | Pre-rRNA-processing protein ESF. | 0.960 |
B2J93_4910 | B2J93_7843 | A0A218ZEW5 | A0A218ZBQ0 | MI domain-containing protein. | Uncharacterized protein. | 0.977 |
B2J93_4910 | B2J93_7879 | A0A218ZEW5 | A0A218ZE31 | MI domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.970 |
B2J93_4910 | B2J93_9393 | A0A218ZEW5 | A0A218ZAL5 | MI domain-containing protein. | Eukaryotic initiation factor 4A; Belongs to the DEAD box helicase family. | 0.969 |
B2J93_4910 | B2J93_98 | A0A218ZEW5 | A0A218Z588 | MI domain-containing protein. | RNA helicase. | 0.980 |
B2J93_4910 | NAT10 | A0A218ZEW5 | A0A218Z9F4 | MI domain-containing protein. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein TAN1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.962 |
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