STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_5147C2H2-type domain-containing protein. (394 aa)    
Predicted Functional Partners:
B2J93_9254
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
 
 0.904
B2J93_6872
CP-type G domain-containing protein.
   
 
 0.869
TIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. Is also involved in ribosome biogenesis. Associates with pre-60S subunits in the nucleus and is involved in its nuclear export; Belongs to the eIF-6 family.
   
 
 0.860
B2J93_9576
Peptidase_M24 domain-containing protein.
   
 
 0.849
B2J93_765
60S ribosomal protein L.
   
 
 0.819
B2J93_2158
60S ribosomal protein L24a.
    
 
 0.782
B2J93_1215
60S ribosomal protein L.
   
 
 0.775
B2J93_4817
60S ribosomal protein L; Belongs to the universal ribosomal protein uL3 family.
    
 
 0.765
B2J93_8813
60S ribosomal protein L.
   
 
 0.764
B2J93_3890
Ribosomal_L18_c domain-containing protein.
   
   0.763
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.