STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_6728Uncharacterized protein. (240 aa)    
Predicted Functional Partners:
B2J93_6870
Uncharacterized protein.
    
 
 0.989
B2J93_7577
COP9 signalosome complex subunit.
    
 
 0.910
B2J93_1033
Uncharacterized protein.
    
   0.903
B2J93_122
Uncharacterized protein.
    
 0.892
B2J93_7220
Uncharacterized protein.
    
 0.892
B2J93_6243
Cytoplasmic dynein 1 heavy chain.
    
 0.856
B2J93_4447
Nucleotide excision repair protein RAD.
   
 0.850
B2J93_6122
Uncharacterized protein.
    
 0.810
B2J93_3646
Cytoplasmic dynein 1 intermediate chain.
    
 0.800
B2J93_1360
DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.
   
 0.769
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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