STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B2J93_6177Seryl-tRNA synthetase. (507 aa)    
Predicted Functional Partners:
B2J93_1404
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.851
B2J93_6928
Seryl-tRNA synthetase.
  
  
 
0.834
B2J93_6178
Uncharacterized protein; Belongs to the actin family.
 
      0.825
B2J93_6610
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.768
B2J93_6151
RNA polymerase II Elongator complex associated protein Kti.
     
 0.739
B2J93_2305
Valyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.732
B2J93_5652
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.701
B2J93_3775
AA_TRNA_LIGASE_II domain-containing protein.
  
 
 0.699
B2J93_2125
Lysine--tRNA ligase.
  
 
 0.697
B2J93_635
Tryptophanyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.696
Your Current Organism:
Marssonina coronariae
NCBI taxonomy Id: 503106
Other names: M. coronariae
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