Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KPA90287.1 | KPA93253.1 | PF66_03421 | PF66_00182 | Transcriptional regulator; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | 0.413 |
KPA93252.1 | KPA93253.1 | PF66_00181 | PF66_00182 | Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Alpha/beta hydrolase family. | Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | 0.595 |
KPA93253.1 | KPA90287.1 | PF66_00182 | PF66_03421 | Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | Transcriptional regulator; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | 0.413 |
KPA93253.1 | KPA93252.1 | PF66_00182 | PF66_00181 | Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | Putative hydrolase or acyltransferase of alpha/beta superfamily; PFAM: Alpha/beta hydrolase family. | 0.595 |
KPA93253.1 | metE | PF66_00182 | PF66_05825 | Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | 0.549 |
metE | KPA93253.1 | PF66_05825 | PF66_00182 | Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family. | Transcriptional regulator, LysR family; 'PFAM: LysR substrate binding domain; Bacterial regulatory helix-turn-helix protein, lysR family'; Belongs to the LysR transcriptional regulatory family. | 0.549 |