STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPA93008.1Putative membrane-associated protein; PFAM: SNARE associated Golgi protein. (203 aa)    
Predicted Functional Partners:
KPA91029.1
PFAM: Flagellar basal body rod FlgEFG protein C-terminal; Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.758
KPA88500.1
8-oxo-dGTPase; PFAM: NUDIX domain; Thiamine monophosphate synthase/TENI; TIGRFAM: mutator mutT protein.
    
 0.745
KPA91598.1
Putative membrane-associated protein; PFAM: SNARE associated Golgi protein.
  
   
 0.605
KPA89113.1
Putative membrane-associated protein; PFAM: PAP2 superfamily; SNARE associated Golgi protein.
 
   
 0.526
KPA93007.1
Transcriptional regulator, AraC family; PFAM: Helix-turn-helix domain; Cupin.
       0.500
KPA89994.1
Acid phosphatase; PFAM: Phosphoesterase family; 'TIGRFAM: acid phosphatase, Burkholderia-type; Tat (twin-arginine translocation) pathway signal sequence'.
     
 0.414
macB
ABC-type antimicrobial peptide transport system, ATPase component; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
    0.400
macB-2
ABC-type antimicrobial peptide transport system, ATPase component; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
    0.400
macB-3
ABC-type antimicrobial peptide transport system, ATPase component; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
    0.400
macB-4
ABC-type antimicrobial peptide transport system, ATPase component; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
    0.400
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.