STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase; PFAM: Amidohydrolase; TIGRFAM: imidazolonepropionase. (401 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 
 0.996
KPA92389.1
PFAM: N-formylglutamate amidohydrolase; TIGRFAM: N-formylglutamate amidohydrolase.
 
  
 0.978
KPA92377.1
Formimidoylglutamate deiminase; PFAM: Amidohydrolase family; TIGRFAM: formiminoglutamate deiminase.
 
 
 0.965
hutH
Histidine ammonia-lyase; PFAM: Aromatic amino acid lyase; TIGRFAM: histidine ammonia-lyase.
 
  
 0.953
KPA92385.1
Histidine ammonia-lyase; PFAM: Aromatic amino acid lyase; TIGRFAM: histidine ammonia-lyase.
 
  
 0.943
KPA93112.1
Histidine ammonia-lyase; PFAM: Aromatic amino acid lyase.
 
  
 0.924
KPA92462.1
Histidine ammonia-lyase; PFAM: Aromatic amino acid lyase; TIGRFAM: phenylalanine ammonia-lyase.
 
  
 0.911
KPA88614.1
Agmatinase; PFAM: Arginase family; TIGRFAM: agmatinase; Belongs to the arginase family.
  
 
 0.885
KPA92378.1
Histidine utilization repressor; 'PFAM: Bacterial regulatory proteins, gntR family; UTRA domain'; 'TIGRFAM: histidine utilization repressor, proteobacterial'.
 
 
 0.869
KPA92387.1
Histidine:proton symporter, AAT family; PFAM: Amino acid permease.
  
    0.835
Your Current Organism:
Pseudomonas fuscovaginae
NCBI taxonomy Id: 50340
Other names: CCUG 32780, CFBP 2065, CIP 106695, DSM 7231, ICMP 5940, LMG 2158, LMG:2158, NCPPB 3085, P. fuscovaginae, PDDCC 5940, PDDCC:5940, Pseudomonas fuscivaginae, strain 6801
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